com.chemaxon.descriptors.fingerprints.ecfp

Class EcfpTableReaderImpl

java.lang.Object

com.chemaxon.descriptors.db.MDTableReader<BinaryVectorDescriptor>

com.chemaxon.descriptors.fingerprints.ecfp.EcfpTableReader

com.chemaxon.descriptors.fingerprints.ecfp.EcfpTableReaderImpl

public class EcfpTableReaderImpl
extends EcfpTableReader

EcfpTableReader implementation.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	EcfpTableReaderImpl.EcfpReaderFactoryImpl Factory implementation for EcfpTableReader.

Nested classes/interfaces inherited from class com.chemaxon.descriptors.fingerprints.ecfp.EcfpTableReader

EcfpTableReader.Factory

Constructor Summary

Constructors

Constructor and Description
EcfpTableReaderImpl(String xmlConfig)

Method Summary

Modifier and Type	Method and Description
EcfpGenerator	getDescriptorGenerator() Associated descriptor generator.
StandardizerWrapper	getStandardizerWrapper() Get represented standardizer wrapper.
String	getXmlConfig() Gets configuration string.
BinaryVectorDescriptor	read(byte[] serialized) Generates a descriptor from a byte array.

Methods inherited from class com.chemaxon.descriptors.fingerprints.ecfp.EcfpTableReader

createNewReader

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

EcfpTableReaderImpl

public EcfpTableReaderImpl(String xmlConfig)

Method Detail

read

public BinaryVectorDescriptor read(byte[] serialized)

Description copied from class: MDTableReader

Generates a descriptor from a byte array. Note that compatibility of the descriptor configuration used to create the serialized form and the one used to create this reader instance can not be checked. The binary form read by this method is compatible only with the binary form provided by the chemaxon.descriptors API implementation for the represented XML configuration. This binary form is not compatible with the DescriptorSerializer represented by the DescriptorGenerator returned by MDTableReader.getDescriptorGenerator().

Specified by:

read in class MDTableReader<BinaryVectorDescriptor>

Parameters:

serialized - Serialize byte array representation

Returns:

a bare descriptor form

getXmlConfig

public String getXmlConfig()

Description copied from class: MDTableReader

Gets configuration string.

Specified by:

getXmlConfig in class MDTableReader<BinaryVectorDescriptor>

Returns:

xml config

getDescriptorGenerator

public EcfpGenerator getDescriptorGenerator()

Description copied from class: MDTableReader

Associated descriptor generator. Associated generator is compatible with the read descriptors created by method MDTableReader.read(byte[]). Note that the DescriptorSerializer exposed by the returned generator is not compatible with the binary form represented by this reader.

Specified by:

getDescriptorGenerator in class EcfpTableReader

Returns:

Associated generator

getStandardizerWrapper

public StandardizerWrapper getStandardizerWrapper()

Description copied from class: MDTableReader

Get represented standardizer wrapper. Note that the represented standardizer configuration might not be recognized by an implementation. In these cases an IllegalStateException is thrown.

Specified by:

getStandardizerWrapper in class MDTableReader<BinaryVectorDescriptor>

Returns:

Represented standardizer wrapper