com.chemaxon.descriptors.vectors.binary

Interface BvGenerator

All Superinterfaces:

BinaryVectorMetricFactory<DescriptorComparator<BinaryVectorDescriptor>>, DescriptorGenerator<BinaryVectorDescriptor>, DescriptorSerializer<BinaryVectorDescriptor>, Guarded, MetricFactory<DescriptorComparator<BinaryVectorDescriptor>>, Serializable

All Known Implementing Classes:

BvGeneratorImpl

@Beta
 @PublicAPI
public interface BvGenerator
extends DescriptorGenerator<BinaryVectorDescriptor>, BinaryVectorMetricFactory<DescriptorComparator<BinaryVectorDescriptor>>

Generator for generic binary vector descriptors.

Note that method DescriptorGenerator.generateDescriptor(chemaxon.struc.Molecule) throws UnsupportedOperationException

Nested Class Summary

Nested classes/interfaces inherited from interface com.chemaxon.descriptors.common.Guarded

Guarded.EnsureThat, Guarded.New

Nested classes/interfaces inherited from interface com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory

BinaryVectorMetricFactory.ToLinenote<C>

Method Summary

Modifier and Type	Method and Description
BinaryVectorDescriptor	fromBitSet(BitSet bits) Create a descriptor from a BitSet representation.
DescriptorComparator<BinaryVectorDescriptor>	getBinaryMetricsComparator(BinaryMetrics metrics) Deprecated. Use BinaryVectorMetricFactory.forBinaryMetrics(com.chemaxon.descriptors.metrics.BinaryMetrics).
DescriptorComparator<BinaryVectorDescriptor>	getTverskyComparator(double coeffQuery, double coeffTarget) Deprecated. Use #forTversky(double, double).
DescriptorComparator<BinaryVectorDescriptor>	getTverskyComparator(TverskyParameters tverskyParamaters) Deprecated. Use BinaryVectorMetricFactory.forBinaryMetrics(com.chemaxon.descriptors.metrics.BinaryMetrics).

Methods inherited from interface com.chemaxon.descriptors.common.DescriptorGenerator

comparisonContextFactory, defaultComparison, generateDescriptor, getBareDescriptor, getDefaultComparator, getParameters

Methods inherited from interface com.chemaxon.descriptors.common.DescriptorSerializer

fromByteArray, fromString, serializerIsEqualWith, toByteArray, toString

Methods inherited from interface com.chemaxon.descriptors.common.Guarded

getGuardObject

Methods inherited from interface com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory

forBinaryMetrics, forTversky, forTverskyCoefficients

Methods inherited from interface com.chemaxon.descriptors.metrics.MetricFactory

comparisonLinenote, defaultComparison

Method Detail

fromBitSet

BinaryVectorDescriptor fromBitSet(BitSet bits)

Create a descriptor from a BitSet representation.

Parameters:

bits - Values to represent.

Returns:

Descriptor representing the given values.

Throws:

IllegalArgumentException - when given BitSet contains set bit which can not be represented by this descriptor.

getBinaryMetricsComparator

@Deprecated
DescriptorComparator<BinaryVectorDescriptor> getBinaryMetricsComparator(BinaryMetrics metrics)

Deprecated. Use BinaryVectorMetricFactory.forBinaryMetrics(com.chemaxon.descriptors.metrics.BinaryMetrics).

Deprecated comparison method kept for compatibility reasons.

Parameters:

metrics - Metrics

Returns:

Comparator

getTverskyComparator

@Deprecated
DescriptorComparator<BinaryVectorDescriptor> getTverskyComparator(double coeffQuery,
                                                                              double coeffTarget)

Deprecated. Use #forTversky(double, double).

Deprecated comparison method kept for compatibility reasons.

Parameters:

coeffQuery - Metric parameter

coeffTarget - Metric parameter

Returns:

Comparator

getTverskyComparator

@Deprecated
DescriptorComparator<BinaryVectorDescriptor> getTverskyComparator(TverskyParameters tverskyParamaters)

Deprecated. Use BinaryVectorMetricFactory.forBinaryMetrics(com.chemaxon.descriptors.metrics.BinaryMetrics).

Deprecated comparison method kept for compatibility reasons.

Parameters:

tverskyParamaters - Metrics parameter

Returns:

Comparator