com.chemaxon.overlap.storage
Class ProcessQueueItem<D>

Object
  com.chemaxon.overlap.storage.ProcessQueueItem<D>

Type Parameters:

D - Represented descriptor type

 class ProcessQueueItem<D>
extends Object

Process queue element data object.

Author:

Gabor Imre

Constructor Summary

ProcessQueueItem(StructureRecord mol)
Construct new instance.

Method Summary

(package private) D	getDescriptor() Calculated descriptor if applicable or null.
(package private) Throwable	getError() Represented error if applicable or null.
(package private) chemaxon.struc.Molecule	getMol() Parsed molecule or null for parse error.
Optional<String>	getMolString() Get represented molecule source if present.
int	getReadno() Represented structure index.
(package private) boolean	isParseError() Check if a parse error occured.
(package private) boolean	isProcessError() Check if process error occured.
(package private) void	ok(D d) Report successfull processing.
boolean	parse() Forward molecule parse.
(package private) void	processError(Throwable t) Report that process error occured.
String	toString()

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ProcessQueueItem

public ProcessQueueItem(StructureRecord mol)

Construct new instance.

Parameters:

mol - Import mol representation

Method Detail

parse

public boolean parse()

Forward molecule parse.

This methow will not throw Exceptions upon parse failure. Parse failure is registered and later can be retrieved.

Returns:

True when successfull TODO: should throw MolFomatException and? report parse errro

processError

void processError(Throwable t)

Report that process error occured.

Parameters:

t - Error

ok

void ok(D d)

Report successfull processing.

Parameters:

d - Created descriptor

getReadno

public int getReadno()

Represented structure index.

Returns:

Represented structure index

getMolString

public Optional<String> getMolString()

Get represented molecule source if present.

Returns:

Molecule source if present

isParseError

boolean isParseError()

Check if a parse error occured.

Returns:

True on parse error

isProcessError

boolean isProcessError()

Check if process error occured.

Returns:

True on process error

getMol

chemaxon.struc.Molecule getMol()

Parsed molecule or null for parse error.

Returns:

Molecule

getError

Throwable getError()

Represented error if applicable or null.

Returns:

Represented error.

getDescriptor

D getDescriptor()

Calculated descriptor if applicable or null.

Returns:

Calculated descriptor

toString

public String toString()

Overrides:

toString in class Object